Functional Genomics

Information materials

 

Brochure “Next-Generation Sequencing”

Publications

Jahr
Year
Titel/Autor:in
Title/Author
Publikationstyp
Publication Type
2021 Presence of viremia during febrile neutropenic episodes in patients undergoing chemotherapy for malignant neoplasms
Andrade, N.; Attarbaschi, A.; Czurda, S.; Dworzak, M.; Egger-Matiqi, T.; Engstler, G.; Frank, T.; Gleixner, K.V.; Größlinger, L.; Grotel, M. van; Grumaz, S.; Herndlhofer, S.; Heuvel-Eibrink, M.M. van den; Keil, F.; Koller, E.; Krickl, I.; Lawitschka, A.; Lion, T.; Moiseev, I.S.; Obrová, K.; Peters, C.; Pichler, H.; Remely, M.; Rogacheva, Y.; Sohn, K.; Sperr, W.R.; Valent, P.; Zubarovskaya, L.; Zubarovskaya, N.
Zeitschriftenaufsatz
Journal Article
2021 Next-generation sequencing diagnostics of bacteremia in pediatric sepsis
Brenner, T.; Bruckner, T.; Decker, S.O.; Dohna-Schwake, C.; Feisst, M.; Felderhoff-Müser, U.; Hoffmann, G.F.; Klose, C.; Luntz, S.; Schmoch, T.; Skarabis, A.; Skolik, C.; Sohn, K.; Weigand, M.A.; Westhoff, J.H.
Zeitschriftenaufsatz
Journal Article
2020 Draft Genome Sequence of Andreprevotia sp. Strain IGB-42, a Chitinolytic Bacterium Isolated from a Soil Sample of an Anthill in Stuttgart, Germany
Glanz, K.; Grumaz, C.; Hahn, T.; Kirstahler, P.; Sohn, K.; Vainshtein, Y.; Werner, N.; Zibek, S.
Zeitschriftenaufsatz
Journal Article
2020 Rapid Next-Generation Sequencing - Based Diagnostics of Bacteremia in Septic Patients
Brenner, T.; Decker, S.O.; Grumaz, C.; Grumaz, S.; Hofer, S.; Hoffmann, A.; Kopp, M.; Sohn, K.; Stevens, P.; Vainshtein, Y.; Weigand, M.A.
Zeitschriftenaufsatz
Journal Article
2019 Stable Redox-Cycling Nitroxide Tempol Has Antifungal and Immune-Modulatory Properties
Dieterich, C.; Grumaz, C.; Häggman, A.; Holmberg, S.; Hosseinzadeh, A.; Johansson, A.; Lopes, J.P.; Müller, D.C.; Sohn, K.; Stylianou, M.; Urban, C.F.
Zeitschriftenaufsatz
Journal Article
2019 Obstructed defecation - an enteric neuropathy? An exploratory study of patient samples
Grumaz, C.; Isbert, C.; Kim, M.; Metzger, M.; Rosenbaum, C.; Schlegel, N.; Sohn, K.; Walles, H.
Zeitschriftenaufsatz
Journal Article
2018 Data-driven fatigue crack quantification and prognosis using nonlinear ultrasonic modulation
Lim, Hyung Jin; Sohn, Hoon; Kim, Yongtak
Zeitschriftenaufsatz
Journal Article
2018 Genetic repertoires of anaerobic microbiomes driving generation of biogas
Bryniok, Dieter; Euchner, Ellen; Grohmann, Anja; Grumaz, Christian; Rabus, Ralf; Sohn, Kai; Vainshtein, Yevhen
Zeitschriftenaufsatz
Journal Article
2018 A novel cytochrome P450 mono‐oxygenase from Streptomyces platensis resembles activities of human drug metabolizing P450s
Bühler, Clemens J. von; Czaja, Rico; Eggimann, Fabian K.; Girhard, Marco; Grumaz, Christian; Kittelmann, Matthas; Lütz, Stephan; Sohn, Kai; Tieves, Florian; Urlacher, Vlada B.; Vogel, Andreas; Worsch, Anne
Zeitschriftenaufsatz
Journal Article
2018 Microbiome dynamics and adaptation of expression signatures during methane production failure and process recovery
Fehrmann, S.; Grohmann, A.; Grumaz, C.; Haag, N.L.; Hartsch, T.; Naegele, H.-J.; Oechsner, H.; Sohn, K.; Stevens, P.; Vainshtein, Y.; Wiese, F.
Zeitschriftenaufsatz
Journal Article
2018 Influence of feedstock powder modification by heat treatments on the properties of APS-sprayed Al2O3-40%TiO2 coatings
Berger, Lutz-Michael; Sempf, Kerstin; Sohn, Yoo Jung; Vaßen, Robert
Zeitschriftenaufsatz
Journal Article
2017 Dual transcriptome of the immediate neutrophil and Candida albicans interplay
Desel, C.; Ermert, D.; Grumaz, C.; Lopes, J.P.; Mills, I.G.; Niemiec, M.J.; Shankar, M.; Sohn, K.; Stevens, P.; Urban, C.F.
Zeitschriftenaufsatz
Journal Article
2017 Influence of feedstock powder modification by heat treatments on the properties of APS-sprayed Al2O3-40%TiO2 coatings
Berger, Lutz-Michael; Vaßen, Robert; Sohn, Yoo Jung
Konferenzbeitrag
Conference Paper
2017 Multi-criterial patient positioning based on dose recalculation on scatter-corrected CBCT images
Hofmaier, J.; Haehnle, J.; Kurz, C.; Landry, G.; Maihoefer, C.; Schüttrumpf, L.; Süss, P.; Teichert, K.; Söhn, M.; Spahr, N.; Brachmann, C.; Weiler, F.; Thieke, C.; Küfer, K.-H.; Belka, C.; Parodi, K.; Kamp, F.
Zeitschriftenaufsatz
Journal Article
2017 Immune-response patterns and next generation sequencing diagnostics for the detection of mycoses in patients with septic shock - results of a combined clinical and experimental investigation
Brenner, T.; Decker, S.O.; Grumaz, C.; Hofer, S.; Sigl, A.; Sohn, K.; Stevens, P.; Vainshtein, Y.; Weigand, M.A.; Zimmermann, S.
Zeitschriftenaufsatz
Journal Article
2017 Draft genome sequences of three Actinobacteria strains presenting new candidate organisms with high potentials for specific P450 cytochromes
Czaja, R.; Eggimann, F.K.; Girhard, M.; Grumaz, C.; Hilberath, T.; Kirstahler, P.; Kittelmann, M.; Luetz, S.; Sandberg, M.; Schroer, K.; Sohn, K.; Urlacher, V.B.; Vainshtein, Y.; Vogel, A.; Worsch, A.
Zeitschriftenaufsatz
Journal Article
2017 Antifungal defense of probiotic Lactobacillus rhamnosus GG is mediated by blocking adhesion and nutrient depletion
Bracher, F.; Braunsdorf, C.; Grumaz, C.; Hebecker, B.; Hube, B.; Lorenz, S.; Mailänder-Sánchez, D.; Müller, C.; Schaller, M.; Sohn, K.; Stevens, P.; Wagener, J.
Zeitschriftenaufsatz
Journal Article
2017 Correction to: Dual transcriptome of the immediate neutrophil and Candida albicans interplay
Desel, C.; Ermert, D.; Grumaz, C.; Lopes, J.P.; Mills, I.G.; Niemiec, M.J.; Shankar, M.; Sohn, K.; Stevens, P.; Urban, C.F.
Zeitschriftenaufsatz
Journal Article
2017 Central role for dermal fibroblasts in skin model protection against Candida albicans
Burger-Kentischer, A.; Finkelmeier, D.; Grumaz, C.; Henkel, H.; Kühbacher, A.; Rupp, S.; Sohn, K.; Stevens, P.
Zeitschriftenaufsatz
Journal Article
2016 Evaluation of state-of-the-art segmentation algorithms for left ventricle infarct from late Gadolinium enhancement MR images
Karim, R.; Bhagirath, P.; Claus, P.; Housden, R.J.; Chen, Z.; Karimaghaloo, Z.; Sohn, H.-M.; Rodriguez, L.L.; Vera, S.; Alba, X.; Hennemuth, A.; Peitgen, H.-O.; Arbel, T.; Gonzàlez Ballester, M.A.; Frangi, A.F.; Götte, M.; Razavi, R.; Schaeffter, T.; Rhode, K.
Zeitschriftenaufsatz
Journal Article
2015 The transcriptomic profile of Pseudozyma aphidis during production of mannosylerythritol lipids
Grumaz, C.; Günther, M.; Hirth, T.; Lindemann, E.; Lorenz, S.; Rupp, S.; Sohn, K.; Stevens, P.; Zibek, S.
Zeitschriftenaufsatz
Journal Article
2015 Stoffwechselanalysen in komplexen mikrobiellen Biozönosen
Grumaz, C.; Sohn, K.; Stevens, P.; Wiese, F.
Zeitschriftenaufsatz
Journal Article
2014 An in vivo photo-cross-linking approach reveals a homodimerization domain of Aha1 in S. cerevisiae
Berg, M.; Michalowski, A.; Palzer, S.; Rupp, S.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2013 Characterization of the protective and immunregulatory activity of probiotic lactobacilli in mucosal Candidiasis
Braunsdorf, C.; Grumaz, C.; Lorenz, S.; Mailander-Sanchez, D.; Schaller, M.; Sohn, K.; Wagener, J.; Wehkamp, J.
Konferenzbeitrag
Conference Paper
2013 An expanded genetic code in Candida albicans to study protein-protein interactions in vivo
Bantel, Y.; Berg, M.; Kazenwadel, F.; Palzer, S.; Rupp, S.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2013 Metatranscriptome analysis reveals new insights in probiotic/host/Candida interaction in oral Candidiasis
Braunsdorf, C.; Grumaz, C.; Lorenz, S.; Mailander-Sanchez, D.; Schaller, M.; Sohn, K.; Wagener, J.
Konferenzbeitrag
Conference Paper
2013 A family of secreted pathogenesis-related proteins in Candida albicans
Brunner, H.; Ermert, D.; Hiller, E.; Lemuth, K.; Lindemann, E.; Röhm, M.; Rupp, S.; Sogukpinar, O.; Sohn, K.; Trkulja, D.; Urban, C.F.
Zeitschriftenaufsatz
Journal Article
2013 Species and condition specific adaptation of the transcriptional landscapes in Candida albicans and Candida dubliniensis
Grumaz, C.; Lindemann, E.; Lorenz, S.; Retey, J.; Rupp, S.; Schock, U.; Sohn, K.; Stevens, P.
Zeitschriftenaufsatz
Journal Article
2012 Differential metatranscriptomic profiling during Candida infections
Grumaz, C.; Hoffmann, H.; Lindemann, E.; Lorenz, S.; Rupp, S.; Sohn, K.; Stevens, P.
Zeitschriftenaufsatz
Journal Article
2012 An expanded genetic code in Candida albicans to study molecular interactions in vivo
Bantel, Y.; Berg, M.; Kazenwadel, F.; Palzer, S.; Rupp, S.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2011 Adaptation, adhesion and invasion during interaction of Candida albicans with the host. Focus on the function of cell wall proteins
Burger-Kentischer, A.; Hauser, N.; Hiller, E.; Lemuth, K.; Rupp, S.; Sohn, K.; Zavrel, M.
Zeitschriftenaufsatz
Journal Article
2011 Das Flachdach - alles andere als eine flache Sache
Sedlbauer, K.; Zillig, W.
Zeitschriftenaufsatz
Journal Article
2010 A multidimensional electrophoretic system of separation for the analysis of gene expression (MESSAGE)
Lindemann, E.; Regenbogen, J.; Rohde, B.; Rupp, S.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2009 Characterization of genes encoding for cell surface proteins induced during hostpathogen interaction
Hauser, N.; Hernandez, R.; Rupp, S.; Sohn, K.; Zavrel, M.
Konferenzbeitrag
Conference Paper
2009 Human epithelial model systems for the study of Candida infections in vitro. Pt.I: Adhesion to epithelial models
Rupp, S.; Sohn, K.
Aufsatz in Buch
Book Article
2009 Fabrication of micro fresnel zone plate lens on a mode-expanded hybrid optical fiber using a femtosecond laser ablation system
Kim, J.K.; Kim, J.; Oh, K.; Sohn, I.B.; Shin, W.; Choi, H.Y.; Lee, B.
Zeitschriftenaufsatz
Journal Article
2009 Host-pathogen interactions
Sammelband
Anthology
2008 Testing the inverse-Compton catastrophe scenario in the intra-day variable blazar S5 0716+71, Rapid and correlated flux density variability from radio to sub-mm bands
Krichbaum, T.P.; Witzel, A.; Kraus, A.; Britzen, S.; Bernhard, S.; Impellizzeri, C.M.V.; Agudo, I.; Klare, J.; Sohn, B.W.; Angelakis, E.; Bach, I.; Gabanyi, K.E.; Krding, E.; Pagels, A.; Zensus, J.A.; Wagner, S.J.; Ostorero, L.; Ungerechts, H.; Grewing, M.; Tornikoski, M.; Apponi, A.J.; Vila-Vilaro, B.; Ziurys, L.M.; Strom, R.G.
Zeitschriftenaufsatz
Journal Article
2008 Organotypical tissue cultures from adult murine colon as an in vitro model of intestinal mucosa
Autenrieth, I.B.; Bareiss, P.M.; Frick, J.S.; Just, L.; Lang, F.; Metzger, M.; Rupp, S.; Schwarz, H.; Skutella, T.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2008 Fabrication and characterization of a broadband long-period grating on a hollow optical fiber with femtosecond laser pulses
Ha, W.; Oh, K.; Jung, Y.M.; Jun, K.K.; Shin, W.; Sohn, I.B.; Ko, D.K.; Lee, J.M.
Zeitschriftenaufsatz
Journal Article
2007 A novel conserved nuclear localization signal is recognized by a group of yeast importins
Bailer, S.; Betz, C.; Caesar, S.; Fries, T.; Schlenstedt, G.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2006 Verbessertes elektrophoretisches Trennverfahren fuer die Analyse der Genexpression
Sohn, K.; Rupp, S.
Patent
2006 Getting in touch with Candida albicans: The cell wall of a fungal pathogen
Lechner, J.; Rupp, S.; Schweikert, M.; Schwenk, J.; Sohn, K.; Urban, C.
Zeitschriftenaufsatz
Journal Article
2006 An in vitro assay to study the transcriptional response during adherence of Candida albicans to different human epithelia
Brunner, H.; Fertey, J.; Hauser, N.; Joffroy, C.; Königsdorfer, A.; Rupp, S.; Senyürek, I.; Sohn, K.; Zelt, G.
Zeitschriftenaufsatz
Journal Article
2006 Universelles Verfahren für die Genexpressionsanalyse
Lindemann, E.; Rupp, S.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2006 Controlled cell attachment, using plasma deposited polymer microstructures: A novel study of cells-substrate interactions
Brunner, H.; Burger-Kentischer, A.; Oehr, C.; Sciarratta, V.; Sohn, K.
Aufsatz in Buch
Book Article
2005 Thioredoxin-Peroxidase von C. albicans als virulenzspezifischer Marker
Urban, C.; Sohn, K.; Brunner, H.; Rupp, S.
Patent
2005 Identification and Characterization of Cor33p, a novel protein implicated in tolerance towards oxidative stress in Candida albicans
Lottspeich, F.; Röhm, M.; Rothenstein, D.; Rupp, S.; Saunders, N.; Schröppel, K.; Sohn, K.; Urban, C.
Zeitschriftenaufsatz
Journal Article
2005 The transcriptional response in C. albicans during adhesion to mammalian epithelia
Brunner, H.; Hauser, N.; Rupp, S.; Senyürek, I.; Sohn, K.; Zelt, G.
Konferenzbeitrag
Conference Paper
2005 The moonlighting protein Tsa1p is implicated in oxidative stress response and in cell wall biogenesis in Candida albicans
Brunner, H.; Rupp, S.; Schröppel, K.; Sohn, K.; Urban, C.
Zeitschriftenaufsatz
Journal Article
2005 Identification of covalently-linked proteins in the cell wall of C. albicans
Brunner, H.; Gnau, V.; Hiller, E.; Nordheim, A.; Rupp, S.; Sohn, K.; Urban, C.
Konferenzbeitrag
Conference Paper
2004 RBR1, a novel pH-regulated cell wall gene of Candida albicans, is repressed by RIM101 and activated by NRG1
Brunner, H.; Lotz, H.; Mühlschlegel, F.A.; Rupp, S.; Sohn, K.
Zeitschriftenaufsatz
Journal Article
2003 Hybrid integrated optical receivers for high-speed data transmission
Berger, J.; Bronner, W.; Dietrich, E.; Hurm, V.; Köhler, K.; Leich, M.; Leuther, A.; Lösch, R.; Rosenzweig, J.; Schlechtweg, M.; Sohn, J.; Walcher, H.
Konferenzbeitrag
Conference Paper
2003 Identification of cell surface determinants in Candida albicans reveals Tsa1p, a protein differentially localized in the cell
Brunner, H.; Lottspeich, F.; Rupp, S.; Sohn, K.; Urban, C.
Zeitschriftenaufsatz
Journal Article
2003 EFG1 is a major regulator of cell wall dynamics in Candida albicans as revealed by DNA microarrays
Brunner, H.; Rupp, S.; Sohn, K.; Urban, C.
Zeitschriftenaufsatz
Journal Article
2003 Identification of cell surface determinants in Candida albicans
Brunner, H.; Lottspeich, F.; Rupp, S.; Schweikert, M.; Sohn, K.; Urban, C.
Zeitschriftenaufsatz
Journal Article
2003 Biochips mit Dimorphismus-spezifischen Faktoren aus Candida albicans
Sohn, K.; Rupp, S.; Brunner, H.
Patent
2002 65 GHz bandwidth optical receiver combining a flip-chip mounted waveguide photodiode and GaAs-based HEMT distributed amplifier
Bronner, W.; Feltgen, T.; Hurm, V.; Köhler, K.; Leich, M.; Rosenzweig, J.; Schlechtweg, M.; Sohn, J.; Walcher, H.
Zeitschriftenaufsatz
Journal Article
2002 High conversion gain flip-chip integrated photoreceivers for broad-band (40 Gbit/s) and narrow-band (10 GHz) applications
Benz, W.; Bronner, W.; Hülsmann, A.; Hurm, V.; Köhler, K.; Kuri, M.; Leven, A.; Ludwig, M.; Massler, H.; Rosenzweig, J.; Schlechtweg, M.; Sohn, J.; Walcher, H.
Konferenzbeitrag
Conference Paper
2001 High conversion gain 10-GHz narrow-band photoreceiver with a flip-chip mounted 1.55 µm waveguide photodiode
Benz, W.; Bronner, W.; Hülsmann, A.; Hurm, V.; Köhler, K.; Kuri, M.; Leven, A.; Massler, H.; Rosenzweig, J.; Schlechtweg, M.; Sohn, J.; Walcher, H.
Konferenzbeitrag
Conference Paper
2001 Hyphenspezifische Faktoren aus Candida albicans
Rupp, S.; Johannes, F.; Sohn, K.
Patent
2001 Regulation of cell wall dynamics in Candida albicans by CPH1 and EFG1, two transcription factors essential for virulence
Brunner, H.; Rupp, S.; Sohn, K.; Urban, C.
Konferenzbeitrag
Conference Paper
2000 Monolithic and hybrid integrated GaAs-based photoreceivers for 40 Gbit/s optical communication
Benz, W.; Berking, M.; Bronner, W.; Hülsmann, A.; Hurm, V.; Köhler, K.; Leven, A.; Ludwig, M.; Massler, H.; Rosenzweig, J.; Schlechtweg, M.; Sohn, J.; Walcher, H.; Weimann, G.
Konferenzbeitrag
Conference Paper
2000 A microarray enzyme-linked immunosorbent assay for autoimmune diagnostics
Chowdhury, U.; Durr, M.; Hammerle, H.; Herick, K.; Hopfl, P.; Joos, T.O.; Kroger, K.; Rupp, S.; Schnorer, D.; Schrenk, M.; Sohn, K.; Stoll, D.
Zeitschriftenaufsatz
Journal Article
2000 Verfahren und Vorrichtung zum Herstellen und Abfuellen von quantitativ definierbaren Gasgemischen mit Komponenten in sehr geringer Konzentration
Sohn, H.; Steinhanses, J.
Patent
2000 Localization and topology of ratp28, a member of a novel family of putative steroid-binding proteins
Jeckel, D.; Nölte, I.; Sohn, K.; Wieland, F.T.
Zeitschriftenaufsatz
Journal Article
Diese Liste ist ein Auszug aus der Publikationsplattform Fraunhofer-Publica

This list has been generated from the publication platform Fraunhofer-Publica